PPDB

The Plant Proteome Database

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AT1G32520.1   TLDc domain protein

Lab Annot. unknown TLD protein
Mapman: 35.2 not assigned.unknown
Curated Location plastid stroma (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os11g11330.1 7Oryza sativa9E-5014762690 (0)C
Os11g11320.1 7Oryza sativa4E-327772850 (0)C
Os05g34870.1 7Oryza sativa2E-2712947560 (0)_
Zm00001eb090700_P002 agpv5Zea mays3E-10524262730 (0)C
Zm00001eb090700_P003 agpv5Zea mays3E-10524262730 (0)C
Zm00001eb090700_P001 agpv5Zea mays3E-10524262730 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: TLD(1)
TargetP: Chloroplast (Class 5 C0.484; M0.063; S0.131; _0.314)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 239 aa (-cTP 236)
Molecular Weight 26.29 kDA(-cTP 26.00)
PI 6.81(-cTP 6.97)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
303Detail       leaf [A. thaliana] chloroplast stromawild-type
420Detail       leaf [A. thaliana] chloroplast stromaclpR1-stop (EMS)
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type
869Detail       leaf [A. thaliana] chloroplast stromawild-type
870Detail       leaf [A. thaliana] chloroplast stromawild-type
871Detail       leaf [A. thaliana] chloroplast stromawild-type
1455Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)
2114Detail       leaf [A. thaliana] Stroma stromawt

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
20423899(chloroplast)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help