PPDB

PPDB	The Plant Proteome Database

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AT1G32490.1 RNA helicase family protein

Lab Annot.

RNA helicase protein
Mapman: 27.1.2 RNA.processing.RNA helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G32490.2 11 Arabidopsis thaliana 0 1044 99 99 2 (2) S
AT2G35340.1 11 Arabidopsis thaliana 0 1046 83 91 0 (0) S
AT2G35340.2 11 Arabidopsis thaliana 0 904 85 93 0 (0) _
Os08g24760.1 7 Oryza sativa 0 1055 71 86 1 (1) _
Os05g32370.1 7 Oryza sativa 0 1064 59 76 0 (0) C
Os02g19860.1 7 Oryza sativa 0 655 57 76 5 (5) _
GRMZM2G121776_P01 3.21 Zea mays 0 627 82 94 0 (0) _
Zm00001eb176340_P001 agpv5 Zea mays 0 582 83 94 0 (0) _
Zm00001eb176340_P002 agpv5 Zea mays 0 582 83 94 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_19(1) AAA_22(1) AAA_29(1) AAA_30(1) AAA_33(2) AAA_7(1) ABC_tran(2) DEAD(1) F
TargetP:	Secreted (Class 3 C0.006; M0.043; S0.936; _0.399)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1044 aa (-cTP 1014)
Molecular Weight	118.83 kDA(-cTP )
PI	5.78(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1401	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
2151	Detail								Total leaf [A. thaliana]	total soluble stroma	wt & cgep

* For details about the exprimental sources click here.

Published Proteomics Data

16807317(Phosphoproteins)
18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data