PPDB

The Plant Proteome Database

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AT1G32410.1   Vacuolar protein sorting 55 (VPS55) family protein

Lab Annot. vacuolar protein sorting 55 protein / VPS55 protein
Mapman: 29.3.4.3 protein.targeting.secretory pathway.vacuole
Curated Location vacuole
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G32410.2 11Arabidopsis thaliana1E-961401001001 (1)S
AT1G32410.3 11Arabidopsis thaliana1E-961401001001 (1)S
AT1G32410.5 11Arabidopsis thaliana1E-961401001001 (1)S
Os02g55980.1 7Oryza sativa1E-5413164830 (0)S
Os01g73570.2 7Oryza sativa4E-3810455760 (0)S
Zm00001eb192110_P001 agpv5Zea mays3E-5512964820 (0)S
v1_GRMZM2G178972_P01 4a53Zea mays3E-5512964820 (0)S
GRMZM2G178972_P01 3.21Zea mays3E-5512964820 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Vps55(1)
TargetP: Secreted (Class 4 C0.003; M0.049; S0.813; _0.486)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 140 aa (-cTP 106)
Molecular Weight 15.02 kDA(-cTP )
PI 4.35(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
15815986(Leaf)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


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