PPDB

The Plant Proteome Database

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AT1G32400.1   tobamovirus multiplication 2A

Lab Annot. TOM2A (TOBAMOVIRUS MULTIPLICATION 2A)
Mapman: 33.99 development.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G32400.3 11Arabidopsis thaliana028010010014 (14)S
AT1G32400.2 11Arabidopsis thaliana028010010014 (14)S
AT2G20230.1 11Arabidopsis thaliana2E-312703149126 (126)S
Os08g18044.2 7Oryza sativa7E-11728561746 (6)S
Os08g06250.1 7Oryza sativa2E-8929050653 (3)S
Os08g18044.1 7Oryza sativa2E-48130667913 (13)S
GRMZM2G049422_P01 3.21Zea mays2E-121281617614 (14)S
GRMZM2G049422_P02 3.21Zea mays2E-121281617614 (14)S
Zm00001eb024230_P001 agpv5Zea mays2E-12128161760 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1206(3) Tetraspanin(2)
TargetP: Secreted (Class 1 C0.001; M0.062; S0.974; _0.039)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 280 aa (-cTP 216)
Molecular Weight 31.56 kDA(-cTP )
PI 5.33(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1345Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 1)
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1494Detail       leaf [A. thaliana]  
1580Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1581Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1765Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0
2252Detail       seedlings [A. thaliana] total tissue gfs9
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
17660356(tonoplast (Brassica oleracea buds))
19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
18686298(tonoplast - phosphoproteome (leaves))
22060019(phosphoproteome - N-starved seedlings)
21533090(plasmodesmata-crude)
20733066(phosphoproteome-ABA-leaf)
22430844(Golgi-cell-culture)
21768351(Leaf-Phosphoproteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help