PPDB

PPDB	The Plant Proteome Database

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AT1G32361.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G35420.1 11 Arabidopsis thaliana 5E-48 249 43 54 0 (0) _
AT4G17920.1 11 Arabidopsis thaliana 1E-44 248 38 54 0 (0) _
AT5G46650.1 11 Arabidopsis thaliana 2E-40 258 35 53 0 (0) _
Os09g29310.1 7 Oryza sativa 4E-19 244 30 41 0 (0) S
Os10g42390.1 7 Oryza sativa 9E-19 87 42 56 0 (0) C
Os02g52210.2 7 Oryza sativa 1E-18 188 32 45 0 (0) M
GRMZM2G035704_P01 3.21 Zea mays 6E-24 256 29 47 0 (0) S
v1_GRMZM2G035704_P01 4a53 Zea mays 6E-24 256 29 47 0 (0) S
Zm00001eb193860_P001 agpv5 Zea mays 7E-24 256 29 47 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3899(2) FANCL_C(1) PHD(1) Prok-RING_1(2) Prok-RING_4(1) Rad50_zn_hook(1) RING
TargetP:	Cytoplasm (Class 5 C0.053; M0.197; S0.187; _0.366)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	332 aa (-cTP 266)
Molecular Weight	38.39 kDA(-cTP )
PI	5.21(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data