PPDB

PPDB	The Plant Proteome Database

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AT1G31970.1 DEA(D/H)-box RNA helicase family protein

Lab Annot.

DEAD box RNA helicase (RH05) (also STRS1)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G63120.2 11 Arabidopsis thaliana 3E-127 427 47 66 2 (1) M
AT1G55150.1 11 Arabidopsis thaliana 8E-125 405 48 66 20 (0) _
AT1G55150.2 11 Arabidopsis thaliana 4E-124 405 48 66 0 (0) _
Os07g20580.1 7 Oryza sativa 0 512 67 79 0 (0) _
Os01g10050.1 7 Oryza sativa 3E-123 430 47 63 4 (4) M
Os01g10050.2 7 Oryza sativa 3E-123 430 47 63 2 (2) M
GRMZM2G076484_P01 3.21 Zea mays 0 476 70 82 4 (3) _
v1_GRMZM2G076484_P01 4a53 Zea mays 0 476 70 82 7 (7) _
Zm00001eb305590_P001 agpv5 Zea mays 0 476 70 82 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_22(2) ALMT(1) CMS1(1) DEAD(2) DUF4778(1) Dynactin_p62(1) ERCC3_RAD25_C(1) Ha
TargetP:	Cytoplasm (Class 4 C0.350; M0.091; S0.130; _0.733)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	537 aa (-cTP 516)
Molecular Weight	59.60 kDA(-cTP )
PI	8.69(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
325	Detail								BY2 cell suspension [Tobacco]	cell wall enriched	wild-type
1408	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data