PPDB

The Plant Proteome Database

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AT1G31790.1   Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G24000.1 11Arabidopsis thaliana5E-3433228470 (0)M
AT5G27110.1 11Arabidopsis thaliana1E-3131728472 (2)M
AT5G50390.1 11Arabidopsis thaliana3E-3031627470 (0)C
Os07g14100.1 7Oryza sativa3E-4934830500 (0)C
Os08g25280.1 7Oryza sativa5E-3327432500 (0)M
Os10g30760.1 7Oryza sativa1E-3232227460 (0)M
v1_GRMZM2G333142_P01 4a53Zea mays7E-4536330483 (3)M
GRMZM2G333142_P01 3.21Zea mays7E-4536330484 (4)M
Zm00001eb304170_P001 agpv5Zea mays2E-4035428480 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PPR(5) PPR_1(3) PPR_2(5) PPR_3(4) PPR_long(2)
TargetP: Chloroplast (Class 3 C0.808; M0.053; S0.035; _0.241)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 409 aa (-cTP 385)
Molecular Weight 46.25 kDA(-cTP 43.67)
PI 7.93(-cTP 8.00)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help