PPDB

PPDB	The Plant Proteome Database

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AT1G31220.1 Formyl transferase

Lab Annot.

phosphoribosylglycinamide formyltransferase
Mapman: 23.1.2.3 nucleotide metabolism.synthesis.purine.GAR transformylase

Curated Location

plastid stroma (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G17360.1 11 Arabidopsis thaliana 4E-15 199 24 48 1 (1) M
AT5G47435.2 11 Arabidopsis thaliana 3E-12 199 24 45 3 (1) M
AT5G47435.1 11 Arabidopsis thaliana 3E-12 199 24 45 3 (1) M
Os08g39160.1 7 Oryza sativa 2E-110 215 71 84 1 (1) C
Os05g18790.1 7 Oryza sativa 1E-109 215 71 83 0 (0) M
Os06g22560.1 7 Oryza sativa 9E-79 174 66 82 0 (0) _
Zm00001eb082710_P001 agpv5 Zea mays 4E-107 215 70 82 0 (0) C
v1_GRMZM2G155626_P01 4a53 Zea mays 4E-107 215 70 82 15 (15) C
GRMZM2G155626_P01 3.21 Zea mays 4E-107 215 70 82 15 (15) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Formyl_trans_N(1)
TargetP:	Chloroplast (Class 1 C0.945; M0.085; S0.011; _0.050)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	292 aa (-cTP 227)
Molecular Weight	32.17 kDA(-cTP 24.96)
PI	8.93(-cTP 7.24)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
303	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
420	Detail								leaf [A. thaliana]	chloroplast stroma	clpR1-stop (EMS)
870	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1483	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 2)
1485	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 3)
1486	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 3)
1525	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1528	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1634	Detail								leaf [A. thaliana]	Stroma stroma	wild-type
1635	Detail								leaf [A. thaliana]	Stroma stroma	clpt1-2
2001	Detail								leaf [A. thaliana]	stroma ClpS stroma	clpS1
2061	Detail								Total leaf [A. thaliana]	chloroplast stroma	wt and cgep
2073	Detail								Total leaf [A. thaliana]	total soluble	wt & prep1xprep2xclpt1xclpt2*
2112	Detail								leaf [A. thaliana]	Stroma stroma	wt
2114	Detail								leaf [A. thaliana]	Stroma stroma	wt
2115	Detail								leaf [A. thaliana]	Stroma stroma	cGep
2321	Detail								leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19995723(chloroplast reference proteome)
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data