PPDB

The Plant Proteome Database

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AT1G31130.1   polyadenylate-binding protein 1-B-binding protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G19950.1 11Arabidopsis thaliana2E-15832170830 (0)_
AT5G44860.1 11Arabidopsis thaliana4E-15832170850 (0)_
AT5G44860.2 11Arabidopsis thaliana4E-15832170850 (0)_
Os01g58620.1 7Oryza sativa1E-9232849660 (0)_
Os08g01590.1 7Oryza sativa9E-4333837540 (0)_
Os08g01590.2 7Oryza sativa9E-4333837540 (0)_
GRMZM2G046911_P01 3.21Zea mays6E-10533351690 (0)_
v1_GRMZM2G046911_P01 4a53Zea mays6E-10533351690 (0)_
v1_GRMZM2G438299_P01 4a53Zea mays1E-9633051680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Bac_export_2(1) DUF2070(1) DUF2418(1)
TargetP: Cytoplasm (Class 2 C0.039; M0.127; S0.097; _0.904)
Predotar:
Subcel. Location:
TM-HMM prediction: 6 TMs
Aramemnon: 7 TMs
TAT position:
Length 321 aa (-cTP 264)
Molecular Weight 35.74 kDA(-cTP )
PI 9.03(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(UNKNOWN-LOPIT-callus)
19525416(leaf (wt and clpr4-1 mutant))
21826108(SYP trans-Golgi-filtered)
22430844(Golgi-cell-culture)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help