PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G31080.1   F-box family protein

Lab Annot. F-box protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G31090.1 11Arabidopsis thaliana5E-11033954660 (0)_
AT1G67130.1 11Arabidopsis thaliana1E-9241343540 (0)_
AT1G30925.1 11Arabidopsis thaliana1E-6935943540 (0)C
Os03g25080.1 7Oryza sativa2E-066142600 (0)C
Os06g07380.1 7Oryza sativa4E-065648580 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(1) F-box-like(2) FBA_1(2) FBA_3(2)
TargetP: Chloroplast (Class 3 C0.775; M0.065; S0.039; _0.351)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 355 aa (-cTP 302) (-lTP 265)
Molecular Weight 41.43 kDA(-cTP 35.44)(-lTP 31.34)
PI 5.91(-cTP 5.37)(-lTP 5.282)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help