PPDB

The Plant Proteome Database

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AT1G30900.1   VACUOLAR SORTING RECEPTOR 6

Lab Annot.
Mapman: 29.3.4.3 protein.targeting.secretory pathway.vacuole
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G34940.1 11Arabidopsis thaliana061375870 (0)S
AT4G20110.1 11Arabidopsis thaliana061170850 (0)S
AT4G20110.2 11Arabidopsis thaliana061969840 (0)S
Os06g45380.1 7Oryza sativa059767814 (4)S
Os10g20630.1 7Oryza sativa060561762 (2)S
Os07g48229.1 7Oryza sativa061161750 (0)S
Zm00001eb389750_P002 agpv5Zea mays062263770 (0)S
v1_GRMZM2G115660_P01 4a53Zea mays062263770 (0)S
GRMZM2G115660_P01 3.21Zea mays062263774 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: cEGF(1) EGF_CA(2) PA(1)
TargetP: Secreted (Class 1 C0.008; M0.044; S0.981; _0.045)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 1 TMs
TAT position:
Length 631 aa (-cTP 616)
Molecular Weight 70.26 kDA(-cTP )
PI 5.37(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help