PPDB

PPDB	The Plant Proteome Database

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AT1G30730.1 FAD-binding Berberine family protein

Lab Annot.

Mapman: 26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G30720.1 11 Arabidopsis thaliana 0 511 81 88 1 (1) S
AT1G34575.1 11 Arabidopsis thaliana 0 528 51 68 0 (0) S
AT1G30710.1 11 Arabidopsis thaliana 5E-179 528 50 68 0 (0) S
Os06g35700.1 7 Oryza sativa 2E-128 508 44 62 0 (0) S
Os06g35650.1 7 Oryza sativa 1E-126 516 43 59 0 (0) S
Os02g14090.1 7 Oryza sativa 3E-126 516 41 60 0 (0) S
Zm00001eb277710_P001 agpv5 Zea mays 1E-135 530 42 61 0 (0) S
GRMZM2G403076_P01 3.21 Zea mays 6E-135 530 42 61 0 (0) _
GRMZM2G080839_P01 3.21 Zea mays 2E-133 508 43 62 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
WallDB-E.Jamet(cell wall reference proteome)
21173025(root proteome)

Comparative Proteomics Data