PPDB

The Plant Proteome Database

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AT1G30710.1   FAD-binding Berberine family protein

Lab Annot.
Mapman: 26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G34575.1 11Arabidopsis thaliana053186910 (0)S
AT1G30720.1 11Arabidopsis thaliana051754701 (1)S
AT1G30730.1 11Arabidopsis thaliana8E-17952850683 (3)S
Os06g35590.1 7Oryza sativa7E-13852242630 (0)S
Os06g35700.1 7Oryza sativa1E-13650843630 (0)S
Os06g35560.1 7Oryza sativa3E-12949342620 (0)S
Zm00001eb277710_P001 agpv5Zea mays7E-14952643620 (0)S
GRMZM2G403076_P01 3.21Zea mays3E-14852644630 (0)_
GRMZM2G080839_P01 3.21Zea mays9E-14451143650 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BBE(1) FAD_binding_4(1)
TargetP: Secreted (Class 1 C0.050; M0.013; S0.967; _0.045)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 531 aa (-cTP 446)
Molecular Weight 59.33 kDA(-cTP )
PI 9.06(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to flower)
19546170(mature pollen grains)
18796151(cell wall (hypocotyl))
WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data


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