PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G30660.1   nucleic acid binding protein
Lab Annot.
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G30660.2 11Arabidopsis thaliana033797970 (0)_
AT1G30660.3 11Arabidopsis thaliana033796960 (0)_
AT1G30680.1 11Arabidopsis thaliana0343798651 (17)M
Os06g45980.1 7Oryza sativa2E-10433452660 (0)C
v1_GRMZM2G164835_P01 4a53Zea mays4E-10934549659 (9)C
Zm00001eb274090_P002 agpv5Zea mays4E-10734549650 (0)C
Zm00001eb274090_P003 agpv5Zea mays4E-10734549650 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Toprim(2) Toprim_2(1) Toprim_3(1) Toprim_4(3)
TargetP: Cytoplasm (Class 2 C0.256; M0.056; S0.069; _0.895)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 337 aa (-cTP 315)
Molecular Weight 37.81 kDA(-cTP )
PI 5.90(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help