PPDB

 The Plant Proteome Database

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AT1G30540.1   Actin-like ATPase superfamily protein
Lab Annot. Actin-like ATPase
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G30540.4 11Arabidopsis thaliana02901001000 (0)_
AT1G30540.3 11Arabidopsis thaliana02741001000 (0)_
AT1G30540.2 11Arabidopsis thaliana02741001000 (0)_
Os09g04800.1 7Oryza sativa2E-15531967814 (4)_
Os07g05380.1 7Oryza sativa6E-15132165820 (0)_
GRMZM2G066293_P01 3.21Zea mays4E-15533166790 (0)_
Zm00001eb261810_P001 agpv5Zea mays4E-15533166790 (0)_
v1_GRMZM2G066293_P01 4a53Zea mays4E-15533166790 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: BcrAD_BadFG(1)
TargetP: Cytoplasm (Class 2 C0.125; M0.181; S0.032; _0.813)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 351 aa (-cTP 288)
Molecular Weight 36.61 kDA(-cTP )
PI 5.05(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2287Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help