PPDB

PPDB	The Plant Proteome Database

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AT1G30510.1 root FNR 2

Lab Annot.

FNR2 (enriched in root)
Mapman: 7.3 OPP.electron transfer

Curated Location

plastid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G30510.2 11 Arabidopsis thaliana 0 382 99 99 12 (9) C
AT1G30510.3 11 Arabidopsis thaliana 0 317 100 100 9 (6) _
AT4G05390.1 11 Arabidopsis thaliana 0 359 83 90 51 (13) C
Os03g57120.1 7 Oryza sativa 0 380 77 86 2 (2) C
Os07g05400.1 7 Oryza sativa 0 380 76 85 4 (4) C
Os03g57120.2 7 Oryza sativa 2E-160 304 72 80 1 (1) C
Zm00001eb299960_P002 agpv5 Zea mays 0 390 73 81 0 (0) C
Zm00001eb059850_P001 agpv5 Zea mays 0 353 81 88 0 (0) C
GRMZM2G058760_P01 3.21 Zea mays 0 353 81 88 13 (13) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FAD_binding_6(1) FAD_binding_9(1) NAD_binding_1(1)
TargetP:	Chloroplast (Class 1 C0.983; M0.032; S0.010; _0.018)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	381 aa (-cTP 318)
Molecular Weight	42.66 kDA(-cTP 35.77)
PI	8.77(-cTP 6.74)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
99	Detail								petal [B. oleracea]	plastid stroma
119	Detail								root [B. rapa]	plastid stroma
127	Detail								leaf [A. thaliana]	plastid thylakoid membrane	wild-type
544	Detail								leaf [A. thaliana]	stroma (FPLC) <600 kDa (LMA)	wild-type
1482	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 1)
1483	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 2)
1484	Detail								leaf [A. thaliana]	chloroplast stroma	clpc1 x clps (rep. 2)
1485	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type (rep. 3)
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
20018591(weak Cu-2+ binding (mitochondria - cell culture))
19114538(guard cells Arabidopsis leaf)
19995723(chloroplast reference proteome)
21311031(mitochondria)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21515685(GreenCut2)

Comparative Proteomics Data