PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G30470.2   SIT4 phosphatase-associated family protein
Lab Annot. SIT4 phosphatase-associated protein
Mapman: 15.2 metal handling.binding, chelation and storage
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G30470.1 11Arabidopsis thaliana0807999948 (26)S
AT1G30470.3 11Arabidopsis thaliana0807949442 (20)S
AT3G45190.1 11Arabidopsis thaliana0696557143 (10)_
Os04g52940.1 7Oryza sativa070362770 (0)_
Os05g51490.1 7Oryza sativa0623708327 (27)_
Os05g51490.2 7Oryza sativa0623708327 (27)_
Zm00001eb160600_P002 agpv5Zea mays062868820 (0)_
Zm00001eb357330_P002 agpv5Zea mays062868820 (0)_
Zm00001eb297310_P002 agpv5Zea mays062367810 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CNOT11(2) SAPS(2)
TargetP: Cytoplasm (Class 3 C0.070; M0.079; S0.305; _0.739)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 805 aa (-cTP 799)
Molecular Weight 89.02 kDA(-cTP )
PI 4.42(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1547Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1548Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1549Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1550Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1551Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1553Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1554Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1572Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2249Detail       seedlings [A. thaliana] total tissue gfs9
2600Detail       rosettes [A. thaliana] total leaf tissue fmtclpc1
2602Detail       Rosettes [A. thaliana] total leaf tissue clpc1

* For details about the exprimental sources click here.

Published Proteomics Data

 21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help