PPDB

PPDB	The Plant Proteome Database

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AT1G30460.2 cleavage and polyadenylation specificity factor 30

Lab Annot.

cleavage and polyadenylation specificity factor 30
Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G30460.1 11 Arabidopsis thaliana 0 391 97 98 0 (0) _
AT1G30460.3 11 Arabidopsis thaliana 6E-180 239 100 100 0 (0) _
AT4G11970.3 11 Arabidopsis thaliana 1E-33 190 38 55 0 (0) _
Os06g46400.1 7 Oryza sativa 6E-153 413 59 68 0 (0) _
Os08g44200.1 7 Oryza sativa 2E-11 141 28 50 0 (0) _
Os03g20180.1 7 Oryza sativa 6E-11 185 25 47 0 (0) _
Zm00001eb273850_P002 agpv5 Zea mays 4E-164 407 60 70 0 (0) _
Zm00001eb224690_P001 agpv5 Zea mays 5E-163 411 60 69 0 (0) _
Zm00001eb273850_P001 agpv5 Zea mays 3E-158 407 59 69 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	TFIIA(1) Torus(3) YTH(3) zf-CCCH(3) zf-CCCH_2(3) zf-CCCH_3(2) zf-CCCH_4(3) zf_CC
TargetP:	Cytoplasm (Class 4 C0.462; M0.040; S0.046; _0.809)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	401 aa (-cTP 349)
Molecular Weight	45.23 kDA(-cTP )
PI	8.15(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)
21533090(plasmodesmata-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data