PPDB

The Plant Proteome Database

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AT1G30440.1   Phototropic-responsive NPH3 family protein

Lab Annot. Phototropic-responsive NPH3 protein
Mapman: 30.11 signalling.light
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G03250.1 11Arabidopsis thaliana062353700 (0)_
AT5G13600.1 11Arabidopsis thaliana061250650 (0)_
AT3G44820.1 11Arabidopsis thaliana3E-17958946660 (0)_
Os03g43990.1 7Oryza sativa065366790 (0)M
Os03g43990.2 7Oryza sativa063666790 (0)_
Os12g41910.1 7Oryza sativa065862760 (0)_
Zm00001eb050610_P001 agpv5Zea mays066164780 (0)_
GRMZM5G812926_P01 3.21Zea mays066164780 (0)_
v1_GRMZM2G011144_P01 4a53Zea mays066164780 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BTB(1) NPH3(1)
TargetP: Cytoplasm (Class 4 C0.135; M0.284; S0.086; _0.505)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 665 aa (-cTP 638)
Molecular Weight 73.41 kDA(-cTP )
PI 6.36(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help