PPDB

 The Plant Proteome Database

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AT1G30080.1   Glycosyl hydrolase superfamily protein
Lab Annot.
Mapman: 26.4 misc.beta 1,3 glucan hydrolases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G30080.2 11Arabidopsis thaliana03801001000 (0)S
AT4G18340.1 11Arabidopsis thaliana039263780 (0)S
AT4G18340.2 11Arabidopsis thaliana1E-17736865790 (0)S
Os06g34020.1 7Oryza sativa1E-14734959740 (0)S
Os01g64170.3 7Oryza sativa5E-12335150682 (2)S
Os01g64170.2 7Oryza sativa5E-12335150682 (2)S
Zm00001eb383310_P001 agpv5Zea mays7E-15640755700 (0)S
v1_GRMZM2G148400_P01 4a53Zea mays7E-15640755700 (0)S
GRMZM2G148400_P01 3.21Zea mays7E-15640755700 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Glyco_hydro_17(1) SR-25(1)
TargetP: Secreted (Class 1 C0.007; M0.046; S0.967; _0.033)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 408 aa (-cTP 318)
Molecular Weight 45.41 kDA(-cTP )
PI 6.12(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help