PPDB

The Plant Proteome Database

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AT1G30070.1   SGS domain-containing protein

Lab Annot. SGS domain-containing protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G30070.2 11Arabidopsis thaliana2E-160229969623 (13)_
AT1G30060.1 11Arabidopsis thaliana7E-11281001000 (0)_
Os01g55270.1 7Oryza sativa4E-9522758809 (9)_
Zm00001eb370650_P002 agpv5Zea mays2E-9222157780 (0)_
Zm00001eb370650_P001 agpv5Zea mays2E-9222157780 (0)_
Zm00001eb152680_P002 agpv5Zea mays2E-8122157790 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CS(1) SGS(1) Siah-Interact_N(1) Sigma70_r3(2)
TargetP: Cytoplasm (Class 5 C0.450; M0.081; S0.019; _0.587)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 222 aa (-cTP 155)
Molecular Weight 24.82 kDA(-cTP )
PI 8.78(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1428Detail        [A. thaliana] total leaf tissue 1.11 Prep1_Prep2_t1_t2
1875Detail       Total leaf [A. thaliana] total soluble wild-type
2286Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2300Detail        [A. thaliana] Clp C1 TRAP
2306Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

17644812(plasma membrane - suspension cells)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data


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