PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G29990.1   prefoldin 6
Lab Annot. prefoldin, putative
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os02g14860.1 7Oryza sativa1E-60119749216 (16)C
Zm00001eb238610_P002 agpv5Zea mays2E-5212366820 (0)_
v1_GRMZM2G049390_P02 4a53Zea mays2E-5212366821 (1)_
GRMZM2G049390_P02 3.21Zea mays2E-5212366821 (1)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Baculo_PEP_C(1) Bcr-Abl_Oligo(2) BRE1(2) Cluap1(1) Crescentin(1) DUF148(1) DUF16
TargetP: Cytoplasm (Class 2 C0.049; M0.169; S0.095; _0.932)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 129 aa (-cTP 127)
Molecular Weight 14.86 kDA(-cTP )
PI 9.07(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1428Detail        [A. thaliana] total leaf tissue 1.11 Prep1_Prep2_t1_t2
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

 21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help