PPDB

PPDB	The Plant Proteome Database

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AT1G29980.2 choice-of-anchor C domain protein%2C putative (Protein of unknown function%2C DUF642)

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

TAIR curated location: anchored to membrane12068095,12805588

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G29980.1 11 Arabidopsis thaliana 0 369 100 100 0 (0) S
AT2G34510.1 11 Arabidopsis thaliana 0 364 83 93 6 (0) S
AT2G34510.2 11 Arabidopsis thaliana 0 316 85 93 0 (0) _
Os01g55190.1 7 Oryza sativa 0 371 66 79 8 (8) S
Os01g34690.1 7 Oryza sativa 7E-165 371 62 74 0 (0) S
Os01g42520.1 7 Oryza sativa 8E-108 342 47 64 0 (0) S
v1_GRMZM2G324705_P01 4a53 Zea mays 0 372 65 79 2 (2) _
Zm00001eb152750_P002 agpv5 Zea mays 2E-180 371 64 78 0 (0) S
GRMZM2G324705_P01 3.21 Zea mays 4E-179 371 64 78 2 (2) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CBM_4_9(2) DUF642(2)
TargetP:	Cytoplasm (Class 1 C0.078; M0.093; S0.103; _0.911)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	371 aa (-cTP 308)
Molecular Weight	40.44 kDA(-cTP )
PI	4.65(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(UNKNOWN-LOPIT-callus)
17317660(Plasma Membrane proteome)
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
20843791(DRM-enriched plasmamembrane)
21173025(root proteome)

Comparative Proteomics Data