PPDB

PPDB	The Plant Proteome Database

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AT1G29980.1 choice-of-anchor C domain protein%2C putative (Protein of unknown function%2C DUF642)

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

TAIR curated location: anchored to membrane12068095,12805588

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G29980.2 11 Arabidopsis thaliana 0 369 100 100 0 (0) _
AT2G34510.1 11 Arabidopsis thaliana 0 379 82 91 5 (0) S
AT2G34510.2 11 Arabidopsis thaliana 0 316 85 93 0 (0) _
Os01g55190.1 7 Oryza sativa 0 375 66 79 8 (8) S
Os01g34690.1 7 Oryza sativa 8E-165 372 62 75 0 (0) S
Os01g42520.1 7 Oryza sativa 2E-108 343 48 64 0 (0) S
Zm00001eb152750_P002 agpv5 Zea mays 0 374 65 79 0 (0) S
v1_GRMZM2G324705_P01 4a53 Zea mays 1E-180 371 64 78 2 (2) _
GRMZM2G324705_P01 3.21 Zea mays 4E-179 374 64 78 2 (2) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CBM_4_9(2) DUF642(2)
TargetP:	Secreted (Class 1 C0.003; M0.105; S0.969; _0.023)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	407 aa (-cTP 386)
Molecular Weight	44.30 kDA(-cTP )
PI	4.65(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(UNKNOWN-LOPIT-callus)
17317660(Plasma Membrane proteome)
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
20843791(DRM-enriched plasmamembrane)
21173025(root proteome)

Comparative Proteomics Data