PPDB

PPDB	The Plant Proteome Database

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AT1G29370.1 RNA polymerase II degradation factor-like protein (DUF1296)

Lab Annot.

Kinase-related protein of unknown function (DUF1296)
Mapman: 29.4 protein.postranslational modification

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G29350.1 11 Arabidopsis thaliana 0 831 98 99 1 (0) _
AT1G29370.2 11 Arabidopsis thaliana 0 679 100 100 0 (0) _
AT4G18150.1 11 Arabidopsis thaliana 4E-112 829 37 51 0 (0) _
Os05g49180.1 7 Oryza sativa 2E-110 896 36 49 16 (16) _
Os01g47430.2 7 Oryza sativa 5E-105 896 33 48 11 (11) _
Os01g47430.1 7 Oryza sativa 9E-84 777 33 49 11 (11) _
Zm00001eb157580_P001 agpv5 Zea mays 8E-108 908 34 49 0 (0) _
v1_GRMZM2G125044_P01 4a53 Zea mays 8E-108 908 34 49 7 (7) _
GRMZM2G125044_P01 3.21 Zea mays 8E-108 908 34 49 11 (11) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1296(1)
TargetP:	Cytoplasm (Class 3 C0.192; M0.207; S0.036; _0.785)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	831 aa (-cTP 791)
Molecular Weight	90.89 kDA(-cTP )
PI	5.69(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
20706207(contaminants cell cycle interactome (cell culture))
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data