PPDB

 The Plant Proteome Database

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AT1G29050.1   TRICHOME BIREFRINGENCE-LIKE 38
Lab Annot. TRICHOME BIREFRINGENCE-LIKE 38
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G34070.1 11Arabidopsis thaliana036680888 (8)S
AT2G34070.2 11Arabidopsis thaliana2E-16025184930 (0)S
AT2G31110.2 11Arabidopsis thaliana5E-15332061788 (0)S
Os01g46350.1 7Oryza sativa4E-15438653712 (2)S
Os01g11810.2 7Oryza sativa1E-13332757710 (0)S
Os01g11810.1 7Oryza sativa2E-13332757710 (0)M
GRMZM2G047298_P01 3.21Zea mays2E-14534155755 (5)M
v1_GRMZM2G047298_P01 4a53Zea mays2E-14534155753 (3)M
Zm00001eb158210_P002 agpv5Zea mays2E-14432457780 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: PC-Esterase(1) PMR5N(1)
TargetP: Secreted (Class 1 C0.007; M0.018; S0.987; _0.026)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 380 aa (-cTP 338)
Molecular Weight 42.71 kDA(-cTP )
PI 9.28(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1611Detail       leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to siliques)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help