PPDB

 The Plant Proteome Database

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AT1G29040.1   50S ribosomal protein L34
Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location plastid stroma (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G29040.5 11Arabidopsis thaliana3E-13619895950 (0)C
AT1G29040.2 11Arabidopsis thaliana1E-13019892925 (5)C
AT1G29040.4 11Arabidopsis thaliana2E-106151989911 (10)C
Os01g42770.1 7Oryza sativa2E-63124708613 (13)C
GRMZM2G001255_P01 3.21Zea mays6E-6615464763 (3)C
Zm00001eb162000_P001 agpv5Zea mays6E-6615464760 (0)C
v1_GRMZM2G001255_P01 4a53Zea mays6E-6615464762 (2)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Lin0512_fam(1)
TargetP: Chloroplast (Class 1 C0.961; M0.061; S0.011; _0.018)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 198 aa (-cTP 139)
Molecular Weight 21.44 kDA(-cTP 14.84)
PI 8.27(-cTP 5.04)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
326Detail       leaf [A. thaliana] chloroplast stromawild-type
873Detail       leaf [A. thaliana] chloroplast stromawild-type
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1458Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 1)
1461Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 1)
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)
1481Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)
1482Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 1)
1484Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 2)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 15539469(vacuole)
18431481(chloroplast)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help