PPDB

PPDB	The Plant Proteome Database

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AT1G29025.1 Calcium-binding EF-hand family protein

Lab Annot.

Mapman:

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

PeptideAtlas POGS PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G29020.2 11 Arabidopsis thaliana 0 577 68 81 0 (0) S
AT1G29020.1 11 Arabidopsis thaliana 0 560 68 82 0 (0) S
AT2G34020.1 11 Arabidopsis thaliana 0 578 62 77 0 (0) M
Os02g14980.1 7 Oryza sativa 7E-80 527 31 51 0 (0) S
Os01g11414.1 7 Oryza sativa 4E-71 531 32 50 7 (7) S
Os02g14980.2 7 Oryza sativa 5E-60 437 30 51 0 (0) S
Zm00001eb238560_P001 agpv5 Zea mays 2E-76 566 31 50 0 (0) M
Zm00001eb338370_P003 agpv5 Zea mays 8E-65 557 29 48 0 (0) M
Zm00001eb338370_P002 agpv5 Zea mays 1E-62 557 29 48 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Dockerin_1(2) EF-hand_1(2) EF-hand_4(2) EF-hand_5(2) EF-hand_6(2) EF-hand_7(2) E
TargetP:	Secreted (Class 1 C0.066; M0.064; S0.939; _0.004)
Predotar:
Subcel. Location:
TM-HMM prediction:	11 TMs
Aramemnon:
TAT position:
Length	578 aa (-cTP 558)
Molecular Weight	64.31 kDA(-cTP )
PI	6.37(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2245	Detail								seedlings [A. thaliana]	total tissue	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data