PPDB

 The Plant Proteome Database

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AT1G28960.1   nudix hydrolase homolog 15
Lab Annot. hydrolase of CoA (and derivatives) (AtNUDX15)
Mapman: 26.13 misc.acid and other phosphatases
Curated Location mitochondria (Pubmed: 18815383 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G28960.3 11Arabidopsis thaliana02931001001 (1)M
AT1G28960.5 11Arabidopsis thaliana02931001001 (1)M
AT1G28960.2 10Arabidopsis thaliana02851001001 (1)M
Os08g28840.1 7Oryza sativa5E-9119765780 (0)C
Os08g28860.1 7Oryza sativa8E-8824556670 (0)_
Os05g11870.1 7Oryza sativa5E-7118061758 (8)M
GRMZM2G044775_P02 3.21Zea mays2E-6818258731 (1)C
v1_GRMZM2G044775_P02 4a53Zea mays2E-6818258731 (1)C
Zm00001eb350700_P002 agpv5Zea mays2E-6818258730 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF4097(1) NUDIX(1)
TargetP: Mitochondria (Class 2 C0.203; M0.881; S0.004; _0.059)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 293 aa (-cTP 264)
Molecular Weight 32.82 kDA(-cTP )
PI 5.35(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1397Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help