PPDB

 The Plant Proteome Database

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AT1G28550.1   RAB GTPase homolog A1I
Lab Annot. AtRABA1i ( Rab GTPase homolog A1i); GTP binding
Mapman: 30.5 signalling.G-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G33870.1 11Arabidopsis thaliana3E-152217939634 (33)_
AT5G60860.1 11Arabidopsis thaliana5E-141217879458 (57)_
AT3G15060.1 11Arabidopsis thaliana7E-139218859452 (51)_
Os09g15790.1 7Oryza sativa8E-139216869414 (14)_
Os05g48980.1 7Oryza sativa2E-138216859422 (22)_
Os06g35814.1 7Oryza sativa1E-126216788952 (52)_
Zm00001eb309950_P001 agpv5Zea mays8E-13921686940 (0)_
GRMZM2G039900_P01 3.21Zea mays2E-138216869421 (21)_
Zm00001eb098230_P001 agpv5Zea mays2E-13821686940 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA_14(1) AAA_16(1) AAA_22(1) AAA_24(1) AAA_28(1) AAA_29(1) ABC_tran(1) Arf(1) D
TargetP: Cytoplasm (Class 2 C0.065; M0.148; S0.228; _0.838)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 218 aa (-cTP 175)
Molecular Weight 24.27 kDA(-cTP )
PI 5.64(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1350Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 3)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
2273Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 17644812(plasma membrane - suspension cells)
19546170(mature pollen grains)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help