PPDB

The Plant Proteome Database

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AT1G28540.1   transmembrane protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os06g33340.1 7Oryza sativa2E-286767820 (0)C
Os06g33340.3 7Oryza sativa2E-286767820 (0)C
Os06g33340.2 7Oryza sativa2E-286767820 (0)C
v1_GRMZM2G141222_P05 4a53Zea mays6E-305974883 (3)_
GRMZM2G141222_P05 3.21Zea mays6E-305974884 (4)_
Zm00001eb194760_P001 agpv5Zea mays1E-082965860 (0)C

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Cytoplasm (Class 4 C0.483; M0.027; S0.059; _0.843)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 103 aa (-cTP 88)
Molecular Weight 11.46 kDA(-cTP )
PI 9.48(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1613Detail       Natural Senescence leaf [A. thaliana]  
1614Detail       Natural Senescence leaf [A. thaliana]  
1615Detail       Natural Senescence leaf [A. thaliana]  
1616Detail       Natural Senescence leaf [A. thaliana]  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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