PPDB

The Plant Proteome Database

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AT1G28530.1   deneddylase

Lab Annot. Angulata10
Mapman: 35.2 not assigned.unknown
Curated Location plastid (Pubmed: 24663344 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G28530.2 11Arabidopsis thaliana061499992 (1)C
Os02g01970.1 7Oryza sativa7E-10059036560 (0)C
Zm00001eb229620_P004 agpv5Zea mays1E-9959037540 (0)C
Zm00001eb229620_P002 agpv5Zea mays1E-9959037540 (0)C
Zm00001eb229620_P001 agpv5Zea mays2E-9958237540 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4335(1) HTH_AsnC-type(2)
TargetP: Chloroplast (Class 2 C0.929; M0.143; S0.051; _0.028)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 614 aa (-cTP 577) (-lTP 524)
Molecular Weight 68.46 kDA(-cTP 64.46)(-lTP 58.81)
PI 7.99(-cTP 6.55)(-lTP 7.249)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2320Detail        [A. thaliana] Thylakoids plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
20061580(chloroplast envelope (inner+outer))

Comparative Proteomics Data


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