PPDB

PPDB	The Plant Proteome Database

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AT1G28420.1 homeobox-1

Lab Annot.

homeobox-1
Mapman: 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G44180.1 11 Arabidopsis thaliana 0 1473 47 62 1 (1) _
AT5G44180.3 11 Arabidopsis thaliana 0 1473 47 62 0 (0) _
AT5G44180.2 11 Arabidopsis thaliana 0 1151 50 64 1 (1) _
Os05g48820.1 7 Oryza sativa 0 1544 44 60 2 (2) _
Os01g48180.1 7 Oryza sativa 0 1331 44 60 0 (0) _
Os01g48170.1 7 Oryza sativa 4E-36 214 42 54 0 (0) _
GRMZM2G122750_P01 3.21 Zea mays 0 1538 45 60 0 (0) _
Zm00001eb343660_P002 agpv5 Zea mays 0 1513 46 60 0 (0) _
Zm00001eb343660_P005 agpv5 Zea mays 0 1543 44 59 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DDT(1) HARE-HTH(1) Homeobox_KN(1) Homeodomain(1) WHIM1(1) WSD(1) zinc-ribbons_6(
TargetP:	Cytoplasm (Class 1 C0.150; M0.054; S0.037; _0.950)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1705 aa (-cTP 1636)
Molecular Weight	191.99 kDA(-cTP )
PI	5.32(-cTP )

Experimental Evidence

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View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2320	Detail								[A. thaliana]	Thylakoids plastoglobule

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19114538(guard cells Arabidopsis leaf)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data