PPDB

PPDB	The Plant Proteome Database

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AT1G28350.1 Nucleotidylyl transferase superfamily protein

Lab Annot.

ATP binding / aminoacyl-tRNA ligase
Mapman: 29.1.1 protein.aa activation.tyrosine-tRNA ligase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G28350.2 11 Arabidopsis thaliana 0 748 100 100 0 (0) _
AT1G28350.3 11 Arabidopsis thaliana 0 682 100 100 0 (0) _
AT2G33840.1 11 Arabidopsis thaliana 0 380 79 88 2 (1) C
Os08g05490.1 7 Oryza sativa 0 361 68 82 11 (11) C
Os08g23110.1 7 Oryza sativa 0 343 70 84 8 (8) C
Os08g09260.1 7 Oryza sativa 2E-126 340 54 71 0 (0) _
GRMZM2G134756_P02 3.21 Zea mays 0 343 71 83 20 (20) _
Zm00001eb416340_P001 agpv5 Zea mays 0 343 71 83 0 (0) _
v1_GRMZM2G134756_P02 4a53 Zea mays 0 343 71 83 17 (17) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C1_4(2) DUF2738(2) DUF3670(2) EF-hand_6(2) tRNA-synt_1b(2) zf-P11(2)
TargetP:	Cytoplasm (Class 3 C0.233; M0.077; S0.262; _0.761)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	748 aa (-cTP 737)
Molecular Weight	84.72 kDA(-cTP )
PI	6.21(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21693672(wound-regulated leaf proteome (wt))
21166475(cytosolic-fractions-crude)
21173025(root proteome)

Comparative Proteomics Data