PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G28290.1 arabinogalactan protein 31

Lab Annot.

arabinogalactan protein 3 (AGP31)
Mapman: 20.2.99 stress.abiotic.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G28290.2 11 Arabidopsis thaliana 5E-95 159 100 100 61 (30) S
AT2G33790.1 11 Arabidopsis thaliana 4E-64 194 61 73 0 (0) S
AT2G34700.1 11 Arabidopsis thaliana 2E-37 150 49 62 19 (16) S
Os05g45460.1 7 Oryza sativa 2E-12 79 45 63 0 (0) S
Os01g52660.1 7 Oryza sativa 5E-12 86 43 59 0 (0) S
Os01g07060.1 7 Oryza sativa 6E-12 148 35 48 0 (0) C
Zm00001eb154390_P001 agpv5 Zea mays 3E-15 85 43 62 0 (0) S
GRMZM2G079883_P01 3.21 Zea mays 3E-15 85 43 62 0 (0) S
v1_GRMZM2G079883_P01 4a53 Zea mays 3E-15 85 43 62 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Big_1(1) bMG3(1) CarbopepD_reg_2(1) CarboxypepD_reg(1) Pollen_Ole_e_1(1) SdrD_B(
TargetP:	Secreted (Class 4 C0.023; M0.038; S0.483; _0.112)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	359 aa (-cTP 348)
Molecular Weight	38.49 kDA(-cTP )
PI	10.18(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
337	Detail								bundle sheaths [A. thaliana]	Bundle sheath total BS strands	wild-type
1113	Detail								[A. thaliana]	control for RARE-1 co-IP	wild-type
1114	Detail								[A. thaliana]	RARE1 co-IP	rare-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1531	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	wild-type (rep. 1)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1535	Detail								leaf [A. thaliana]		wild-type
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2237	Detail								seedlings [A. thaliana]	total tissue	gfs9
2238	Detail								seedlings [A. thaliana]	total tissue	gfs9
2245	Detail								seedlings [A. thaliana]	total tissue	wild-type
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
18796151(cell wall (hypocotyl))
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19714877(interactomes 14-3-3 complexes (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data