PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G28200.1 FH interacting protein 1

Lab Annot.

FIP1 (FH INTERACTING PROTEIN 1)
Mapman: 17.1.3 hormone metabolism.abscisic acid.induced-regulated-responsive-activated

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G28200.2 11 Arabidopsis thaliana 0 259 100 100 0 (0) _
AT2G22475.1 11 Arabidopsis thaliana 7E-95 198 64 82 5 (0) _
AT2G22475.2 11 Arabidopsis thaliana 2E-64 146 63 80 4 (0) _
Os03g08860.1 7 Oryza sativa 6E-105 231 65 78 0 (0) _
Os06g11430.1 7 Oryza sativa 1E-87 196 60 79 0 (0) C
Os09g29120.1 7 Oryza sativa 6E-77 177 56 80 0 (0) C
Zm00001eb006620_P001 agpv5 Zea mays 8E-97 230 62 78 0 (0) _
GRMZM2G009326_P01 3.21 Zea mays 8E-97 230 62 78 19 (12) _
v1_GRMZM2G009326_P01 4a53 Zea mays 8E-97 230 62 78 1 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	GRAM(1)
TargetP:	Cytoplasm (Class 4 C0.433; M0.060; S0.037; _0.732)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	259 aa (-cTP 184)
Molecular Weight	27.96 kDA(-cTP )
PI	6.16(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2248	Detail								seedlings [A. thaliana]	total tissue	wild-type
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

17660356(tonoplast (Brassica oleracea buds))
19200160(flower-stage 12)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data