PPDB

PPDB	The Plant Proteome Database

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AT1G28180.1 DEAD-box ATP-dependent RNA helicase-like protein

Lab Annot.

DEAD box RNA helicase (RH44)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

PeptideAtlas POGS PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G33730.1 11 Arabidopsis thaliana 0 384 72 82 25 (4) _
AT5G63120.2 11 Arabidopsis thaliana 2E-87 349 42 60 3 (1) M
AT1G55150.1 11 Arabidopsis thaliana 7E-86 371 40 57 21 (0) _
Os03g50090.3 7 Oryza sativa 0 384 69 79 1 (1) _
Os03g50090.1 7 Oryza sativa 0 384 69 79 1 (1) _
Os03g50090.2 7 Oryza sativa 0 384 69 79 1 (1) _
v1_GRMZM2G123459_P01 4a53 Zea mays 0 384 69 80 8 (8) C
Zm00001eb216520_P001 agpv5 Zea mays 0 384 69 80 0 (0) C
Zm00001eb216520_P003 agpv5 Zea mays 0 384 69 80 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEAD(2) DUF2608(1) Helicase_C(2) HEM4(2) ResIII(2)
TargetP:	Cytoplasm (Class 4 C0.202; M0.206; S0.070; _0.558)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	368 aa (-cTP 337)
Molecular Weight	41.84 kDA(-cTP )
PI	8.42(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data