PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G28130.1 Auxin-responsive GH3 family protein

Lab Annot.

Auxin-responsive GH3 protein
Mapman: 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated

Curated Location

TAIR curated location: nucleus & cytoplasm15610358

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G28130.2 11 Arabidopsis thaliana 0 466 100 100 1 (1) _
AT5G54510.1 11 Arabidopsis thaliana 0 592 58 76 3 (3) _
AT4G27260.1 11 Arabidopsis thaliana 0 592 58 75 1 (1) _
Os07g47490.2 7 Oryza sativa 0 591 58 75 0 (0) _
Os07g47490.1 7 Oryza sativa 0 591 58 75 0 (0) _
Os07g47490.3 7 Oryza sativa 0 583 58 75 0 (0) _
Zm00001eb113360_P002 agpv5 Zea mays 0 622 62 76 0 (0) _
Zm00001eb113360_P003 agpv5 Zea mays 0 622 62 76 0 (0) _
GRMZM2G410567_P01 3.21 Zea mays 0 622 62 76 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	GH3(1)
TargetP:	Cytoplasm (Class 2 C0.094; M0.130; S0.063; _0.875)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	609 aa (-cTP 563)
Molecular Weight	68.86 kDA(-cTP )
PI	5.11(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data