PPDB

PPDB	The Plant Proteome Database

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AT1G28040.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G46494.1 11 Arabidopsis thaliana 2E-117 303 61 71 0 (0) S
AT2G46495.1 11 Arabidopsis thaliana 1E-101 304 56 69 0 (0) S
AT2G46495.2 11 Arabidopsis thaliana 5E-95 299 53 65 0 (0) S
Os01g53500.1 7 Oryza sativa 1E-15 74 50 63 0 (0) S
Os02g46600.1 7 Oryza sativa 2E-14 83 40 63 0 (0) _
Os11g47700.1 7 Oryza sativa 5E-14 55 50 67 0 (0) _
Zm00001eb413840_P001 agpv5 Zea mays 1E-17 73 54 63 0 (0) S
GRMZM2G356895_P01 3.21 Zea mays 2E-17 73 54 63 0 (0) M
Zm00001eb409590_P001 agpv5 Zea mays 2E-17 73 54 63 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) PHD(1) RINGv(1) WAK_assoc(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1)
TargetP:	Cytoplasm (Class 1 C0.058; M0.054; S0.037; _0.903)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	299 aa (-cTP 229)
Molecular Weight	33.50 kDA(-cTP )
PI	8.26(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data