PPDB

The Plant Proteome Database

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AT1G28000.1   Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G28020.1 11Arabidopsis thaliana1E-6631242630 (0)M
AT2G20710.1 11Arabidopsis thaliana8E-4729736540 (0)M
AT1G43010.1 11Arabidopsis thaliana1E-4524141600 (0)M
Os10g35750.1 7Oryza sativa5E-2526527490 (0)M
Os07g40750.1 7Oryza sativa7E-2527727460 (0)M
Os10g35760.2 7Oryza sativa5E-2425628510 (0)M
GRMZM2G131817_P01 3.21Zea mays2E-2427128460 (0)M
v1_GRMZM2G131817_P02 4a53Zea mays2E-2427128460 (0)M
Zm00001eb044350_P001 agpv5Zea mays2E-2427128460 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ATP13(3) PPR(4) PPR_2(3) PPR_3(3)
TargetP: Mitochondria (Class 1 C0.069; M0.919; S0.007; _0.030)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 388 aa (-cTP 350)
Molecular Weight 43.09 kDA(-cTP )
PI 7.54(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1983Detail       leaf [A. thaliana] plastid wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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