PPDB

The Plant Proteome Database

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AT1G27990.1   transmembrane protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G52420.1 11Arabidopsis thaliana7E-35248335012 (12)_
AT5G23920.1 11Arabidopsis thaliana3E-25211344717 (17)_
Os04g31710.1 7Oryza sativa2E-9626362760 (0)_
Os10g40040.1 7Oryza sativa2E-2420837500 (0)_
Zm00001eb421070_P001 agpv5Zea mays5E-10029258690 (0)_
GRMZM2G001853_P02 3.21Zea mays5E-10029258690 (0)_
v1_GRMZM2G001853_P02 4a53Zea mays5E-10029258690 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Cytoplasm (Class 1 C0.052; M0.070; S0.009; _0.914)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 4 TMs
TAT position:
Length 271 aa (-cTP 252)
Molecular Weight 29.76 kDA(-cTP )
PI 9.69(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help