PPDB

 The Plant Proteome Database

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AT1G27940.1   P-glycoprotein 13
Lab Annot.
Mapman: 34.16 transport.ABC transporters and multidrug resistance systems
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G28010.1 11Arabidopsis thaliana0124789940 (0)_
AT1G27940.2 11Arabidopsis thaliana010311001000 (0)_
AT3G28860.1 11Arabidopsis thaliana01255507023 (23)_
Os04g38570.1 7Oryza sativa0123850705 (5)_
Os02g46680.1 7Oryza sativa01248507010 (10)_
Os08g45030.1 7Oryza sativa01235486913 (13)_
v1_GRMZM2G072850_P01 4a53Zea mays0123151707 (7)_
GRMZM2G072850_P01 3.21Zea mays0123151707 (7)_
Zm00001eb068880_P003 agpv5Zea mays0123151700 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA(2) AAA_15(2) AAA_16(2) AAA_17(2) AAA_18(2) AAA_19(2) AAA_21(2) AAA_22(2) AAA
TargetP: Cytoplasm (Class 1 C0.051; M0.022; S0.074; _0.990)
Predotar:
Subcel. Location:
TM-HMM prediction: 11 TMs
Aramemnon: 12 TMs
TAT position:
Length 1245 aa (-cTP 1232)
Molecular Weight 135.77 kDA(-cTP )
PI 9.16(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help