PPDB

The Plant Proteome Database

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AT1G27930.1   glucuronoxylan 4-O-methyltransferase-like protein (DUF579)

Lab Annot. unknown protein DUF579 domain
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G67330.1 11Arabidopsis thaliana3E-14028369780 (0)S
AT1G71690.1 11Arabidopsis thaliana9E-7724647680 (0)S
AT1G09610.1 11Arabidopsis thaliana4E-7521152690 (0)S
Os11g29780.1 7Oryza sativa8E-7826950630 (0)S
Os12g10320.1 7Oryza sativa3E-67210506416 (16)S
Os06g47310.1 7Oryza sativa8E-4421637586 (6)_
v1_GRMZM2G401511_P01 4a53Zea mays1E-7523056680 (0)M
GRMZM2G401511_P01 3.21Zea mays1E-7523056680 (0)M
Zm00001eb112820_P001 agpv5Zea mays1E-7523056680 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Polysacc_synt_4(1)
TargetP: Secreted (Class 3 C0.007; M0.081; S0.749; _0.193)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 289 aa (-cTP 237)
Molecular Weight 32.36 kDA(-cTP )
PI 9.24(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1641Detail       leaf [A. thaliana] total tissue shoot1 mutant
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(UNKNOWN-LOPIT-callus)
18436743(specific to roots)
19546170(mature pollen grains)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
22430844(Golgi-cell-culture)

Comparative Proteomics Data


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