PPDB

PPDB	The Plant Proteome Database

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AT1G27910.1 plant U-box 45

Lab Annot.

plant U-box 45
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G24330.2 11 Arabidopsis thaliana 0 776 65 78 0 (0) _
AT1G24330.1 11 Arabidopsis thaliana 0 776 65 78 0 (0) _
AT1G67530.1 11 Arabidopsis thaliana 0 791 64 76 0 (0) _
Os01g67500.1 7 Oryza sativa 0 810 55 69 0 (0) _
Os01g67500.3 7 Oryza sativa 0 658 56 69 0 (0) _
Os04g41250.1 7 Oryza sativa 0 740 44 63 0 (0) _
Zm00001eb144430_P002 agpv5 Zea mays 0 810 55 69 0 (0) _
Zm00001eb144430_P004 agpv5 Zea mays 0 810 55 69 0 (0) _
Zm00001eb144430_P003 agpv5 Zea mays 0 810 55 69 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Arm(3) Cnd1(1) DUF3361(1) KAP(2) U-box(1) Wap1(2) zf-C3HC4_4(2) zf-Nse(1) zf-RIN
TargetP:	Cytoplasm (Class 1 C0.090; M0.036; S0.029; _0.906)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	768 aa (-cTP 708)
Molecular Weight	85.57 kDA(-cTP )
PI	5.40(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data