PPDB

PPDB	The Plant Proteome Database

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AT1G27900.1 RNA helicase family protein

Lab Annot.

Mapman: 27.1.2 RNA.processing.RNA helicase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G27900.3 11 Arabidopsis thaliana 0 539 100 100 0 (0) _
AT1G27900.2 11 Arabidopsis thaliana 0 539 100 100 0 (0) _
AT3G26560.1 11 Arabidopsis thaliana 0 645 44 65 10 (2) _
Os11g20554.1 7 Oryza sativa 0 699 72 84 0 (0) C
Os08g24760.1 7 Oryza sativa 0 638 44 66 1 (1) _
Os02g19860.1 7 Oryza sativa 0 643 44 65 5 (5) _
GRMZM2G029258_P01 3.21 Zea mays 0 643 44 65 4 (2) _
GRMZM2G012453_P01 3.21 Zea mays 0 634 44 66 1 (0) M
v1_GRMZM2G012453_P01 4a53 Zea mays 0 634 44 66 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_14(1) AAA_16(1) AAA_19(1) AAA_22(1) AAA_23(1) AAA_29(1) AAA_30(1) AAA_33(1)
TargetP:	Cytoplasm (Class 4 C0.420; M0.016; S0.025; _0.783)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	700 aa (-cTP 636)
Molecular Weight	78.37 kDA(-cTP )
PI	8.19(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data