PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G27890.1   Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein

Lab Annot.
Mapman: 27.1.19 RNA.processing.ribonucleases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G27820.1 11Arabidopsis thaliana030491930 (0)_
AT1G61470.1 11Arabidopsis thaliana6E-15030673790 (0)_
AT3G44240.1 11Arabidopsis thaliana8E-7021854660 (0)_
Os07g07430.1 7Oryza sativa5E-3524534510 (0)_
Os04g58810.1 7Oryza sativa1E-3423336490 (0)C
Os08g34170.1 7Oryza sativa6E-3324133500 (0)_
Zm00001eb377720_P001 agpv5Zea mays1E-3923137530 (0)M
Zm00001eb377730_P001 agpv5Zea mays1E-3823136530 (0)C
Zm00001eb282280_P001 agpv5Zea mays6E-3823036530 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AHD(1) CAF1(2)
TargetP: Cytoplasm (Class 2 C0.122; M0.128; S0.117; _0.864)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 302 aa (-cTP 290)
Molecular Weight 34.86 kDA(-cTP )
PI 7.65(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19376835(leaf phosphoproteins)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help