PPDB

The Plant Proteome Database

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AT1G27840.1   Transducin/WD40 repeat-like superfamily protein

Lab Annot. Transducin/WD40 repeat-like protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G27840.3 11Arabidopsis thaliana045199990 (0)C
AT1G19750.1 11Arabidopsis thaliana045092950 (0)M
AT1G27840.2 11Arabidopsis thaliana045180820 (0)C
Os02g20430.1 7Oryza sativa6E-15245650610 (0)M
Os01g63900.1 7Oryza sativa1E-5918652690 (0)C
Os03g51550.1 7Oryza sativa1E-0936623392 (2)C
Zm00001eb147340_P003 agpv5Zea mays042963760 (0)M
Zm00001eb147340_P002 agpv5Zea mays042963760 (0)M
GRMZM2G096802_P01 3.21Zea mays2E-15842655680 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(5) Nup160(3) WD40(5)
TargetP: Chloroplast (Class 4 C0.704; M0.417; S0.010; _0.107)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 450 aa (-cTP 389) (-lTP 312)
Molecular Weight 49.65 kDA(-cTP 42.53)(-lTP 34.11)
PI 8.83(-cTP 7.26)(-lTP 8.495)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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