PPDB

The Plant Proteome Database

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AT1G27740.1   root hair defective 6-like 4

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G43175.1 11Arabidopsis thaliana1E-8726557670 (0)_
AT4G33880.1 11Arabidopsis thaliana3E-5112568810 (0)_
AT2G14760.1 11Arabidopsis thaliana1E-4913463740 (0)_
Os12g39850.1 7Oryza sativa1E-499681910 (0)_
Os07g39940.1 7Oryza sativa1E-4711668790 (0)_
Os03g42100.1 7Oryza sativa6E-4618149640 (0)_
Zm00001eb326150_P001 agpv5Zea mays4E-448482920 (0)_
Zm00001eb108190_P001 agpv5Zea mays7E-4411763760 (0)_
v1_GRMZM2G383841_P01 4a53Zea mays7E-4411763760 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HLH(1) Tom22(1)
TargetP: Cytoplasm (Class 4 C0.222; M0.082; S0.078; _0.609)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 258 aa (-cTP 188)
Molecular Weight 29.16 kDA(-cTP )
PI 6.17(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help