PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G27695.1   glycine-rich protein

Lab Annot. glycine-rich protein
Mapman: 35.1.40 not assigned.no ontology.glycine rich proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G27695.2 11Arabidopsis thaliana3E-58911001004 (2)_
Os12g32284.1 7Oryza sativa2E-088764810 (0)_

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF5320(1) Keratin_2_head(1) KRTAP(2)
TargetP: Cytoplasm (Class 4 C0.111; M0.060; S0.364; _0.675)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 91 aa (-cTP 8)
Molecular Weight 9.17 kDA(-cTP )
PI 5.60(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help