PPDB

The Plant Proteome Database

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AT1G27650.1   U2 snRNP auxiliary factor small subunit

Lab Annot. U2 snRNP auxiliary factor small subunit, putative
Mapman: 27.1.1 RNA.processing.splicing
Curated Location
TAIR curated location: nucleus16407443
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G27650.2 11Arabidopsis thaliana2E-1792461001000 (0)_
AT5G42820.1 11Arabidopsis thaliana5E-14229278830 (0)_
AT5G42820.2 11Arabidopsis thaliana5E-14229278830 (0)_
Os09g31482.1 7Oryza sativa2E-13129666772 (2)_
Os09g31482.3 7Oryza sativa2E-13129666772 (2)_
Os05g48960.3 7Oryza sativa4E-12318584952 (2)_
GRMZM2G031827_P05 3.21Zea mays2E-140318667527 (27)_
GRMZM2G031827_P01 3.21Zea mays2E-140318667527 (27)_
GRMZM2G031827_P04 3.21Zea mays2E-140318667527 (27)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: RRM_1(1) Torus(2) zf-CCCH(2) zf-CCCH_3(2) zf-CCCH_4(2) zf_CCCH_4(2)
TargetP: Cytoplasm (Class 3 C0.332; M0.135; S0.026; _0.767)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 296 aa (-cTP 248)
Molecular Weight 34.57 kDA(-cTP )
PI 9.48(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
21173025(root proteome)
20813957(SUMO proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


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